2017-08-15 32 views
0

Ich versuche, das Osx Sierra JVM-Paket zu bauen. Allerdings MVN -DskipTests installieren scheint zum Scheitern verurteilt und fünf der folgenden FehlerMacOS Sierra Xgboost JVM Paket Installation Fehler

CMake Error at /usr/local/Cellar/cmake/3.7.2/share/cmake/Modules/CMakeDetermineCCompiler.cmake:48 (message): 
    Could not find compiler set in environment variable CC: 

    gcc-6. 
Call Stack (most recent call first): 
    CMakeLists.txt:2 (project) 


CMake Error: CMAKE_C_COMPILER not set, after EnableLanguage 
CMake Error: CMAKE_CXX_COMPILER not set, after EnableLanguage 
-- Configuring incomplete, errors occurred! 
See also "/Users/rjohri/xgboost/build/CMakeFiles/CMakeOutput.log". 
building Java wrapper 
cd .. 
mkdir -p build 
cd build 
cmake .. -DUSE_S3:BOOL=OFF -DUSE_OPENMP:BOOL=OFF -DPLUGIN_UPDATER_GPU:BOOL=OFF -DUSE_AZURE:BOOL=OFF -DUSE_HDFS:BOOL=OFF -DJVM_BINDINGS:BOOL=ON 
Traceback (most recent call last): 
    File "create_jni.py", line 88, in <module> 
    run("cmake .. " + " ".join(args) + maybe_generator) 
    File "create_jni.py", line 51, in run 
    subprocess.check_call(command, shell=True, **kwargs) 
    File "/Users/rjohri/anaconda/lib/python2.7/subprocess.py", line 540, in check_call 
    raise CalledProcessError(retcode, cmd) 
subprocess.CalledProcessError: Command 'cmake .. -DUSE_S3:BOOL=OFF -DUSE_OPENMP:BOOL=OFF -DPLUGIN_UPDATER_GPU:BOOL=OFF -DUSE_AZURE:BOOL=OFF -DUSE_HDFS:BOOL=OFF -DJVM_BINDINGS:BOOL=ON' returned non-zero exit status 1 
[ERROR] Command execution failed. 
org.apache.commons.exec.ExecuteException: Process exited with an error: 1 (Exit value: 1) 
    at org.apache.commons.exec.DefaultExecutor.executeInternal(DefaultExecutor.java:404) 
    at org.apache.commons.exec.DefaultExecutor.execute(DefaultExecutor.java:166) 
    at org.codehaus.mojo.exec.ExecMojo.executeCommandLine(ExecMojo.java:804) 
    at org.codehaus.mojo.exec.ExecMojo.executeCommandLine(ExecMojo.java:751) 
    at org.codehaus.mojo.exec.ExecMojo.execute(ExecMojo.java:313) 
    at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:134) 
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:207) 
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) 
    at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) 
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:116) 
    at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:80) 
    at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build(SingleThreadedBuilder.java:51) 
    at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:128) 
    at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:307) 
    at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:193) 
    at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:106) 
    at org.apache.maven.cli.MavenCli.execute(MavenCli.java:863) 
    at org.apache.maven.cli.MavenCli.doMain(MavenCli.java:288) 
    at org.apache.maven.cli.MavenCli.main(MavenCli.java:199) 
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 
    at java.lang.reflect.Method.invoke(Method.java:497) 
    at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced(Launcher.java:289) 
    at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:229) 
    at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode(Launcher.java:415) 
    at org.codehaus.plexus.classworlds.launcher.Launcher.main(Launcher.java:356) 
[INFO] ------------------------------------------------------------------------ 
[INFO] Reactor Summary: 
[INFO] 
[INFO] xgboost-jvm ........................................ SUCCESS [ 4.922 s] 
[INFO] xgboost4j .......................................... FAILURE [ 1.799 s] 
[INFO] xgboost4j-spark .................................... SKIPPED 
[INFO] xgboost4j-flink .................................... SKIPPED 
[INFO] xgboost4j-example .................................. SKIPPED 
[INFO] ------------------------------------------------------------------------ 
[INFO] BUILD FAILURE 
[INFO] ------------------------------------------------------------------------ 
[INFO] Total time: 6.851 s 
[INFO] Finished at: 2017-08-15T10:10:03+01:00 
[INFO] Final Memory: 25M/391M 
[INFO] ------------------------------------------------------------------------ 
[ERROR] Failed to execute goal org.codehaus.mojo:exec-maven-plugin:1.6.0:exec (native) on project xgboost4j: Command execution failed. Process exited with an error: 1 (Exit value: 1) -> [Help 1] 

Ich habe meine config.mk aktualisiert, um den gcc-Compiler

# choice of compiler, by default use system preference. 
export CC = gcc-6 
export CXX = g++-6 

umfasse Aber es scheint, als ob es mich braucht, dass einige Änderungen wo sonst? Ich bin mir nicht sicher, welche weiteren Änderungen ich machen muss. Ich habe das xgboost-Paket mit ./build.sh erstellt, das erfolgreich ausgeführt wurde und die Single-Thread-Version von xgboost installiert hat. Der Fehler ist aufgetreten, als ich versucht habe, das jvm-Paket zu installieren. Auch macht -j4 nicht für mich arbeiten, wie in der Dokumentation vorgeschlagen, da es Probleme mit fopenmp hat und gibt die folgenden Fehler

Makefile:31: MAKE [/Applications/Xcode.app/Contents/Developer/usr/bin/make] - checked OK 
g++-6 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -o xgboost build/cli_main.o build/learner.o build/logging.o build/c_api/c_api.o build/c_api/c_api_error.o build/common/common.o build/common/hist_util.o build/data/data.o build/data/simple_csr_source.o build/data/simple_dmatrix.o build/data/sparse_page_dmatrix.o build/data/sparse_page_raw_format.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/gbm/gblinear.o build/gbm/gbm.o build/gbm/gbtree.o build/metric/elementwise_metric.o build/metric/metric.o build/metric/multiclass_metric.o build/metric/rank_metric.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/predictor/cpu_predictor.o build/predictor/predictor.o build/tree/tree_model.o build/tree/tree_updater.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/tree/updater_histmaker.o build/tree/updater_prune.o build/tree/updater_refresh.o build/tree/updater_skmaker.o build/tree/updater_sync.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp 
make: g++-6: No such file or directory 
ar crv lib/libxgboost.a 
g++-6 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -shared -o lib/libxgboost.dylib build/learner.o build/logging.o build/c_api/c_api.o build/c_api/c_api_error.o build/common/common.o build/common/hist_util.o build/data/data.o build/data/simple_csr_source.o build/data/simple_dmatrix.o build/data/sparse_page_dmatrix.o build/data/sparse_page_raw_format.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/gbm/gblinear.o build/gbm/gbm.o build/gbm/gbtree.o build/metric/elementwise_metric.o build/metric/metric.o build/metric/multiclass_metric.o build/metric/rank_metric.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/predictor/cpu_predictor.o build/predictor/predictor.o build/tree/tree_model.o build/tree/tree_updater.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/tree/updater_histmaker.o build/tree/updater_prune.o build/tree/updater_refresh.o build/tree/updater_skmaker.o build/tree/updater_sync.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp 
make: g++-6: No such file or directory 
make: *** [xgboost] Error 1 
make: *** Waiting for unfinished jobs.... 
make: *** [lib/libxgboost.dylib] Error 1 
ar: no archive members specified 
usage: ar -d [-TLsv] archive file ... 
    ar -m [-TLsv] archive file ... 
    ar -m [-abiTLsv] position archive file ... 
    ar -p [-TLsv] archive [file ...] 
    ar -q [-cTLsv] archive file ... 
    ar -r [-cuTLsv] archive file ... 
    ar -r [-abciuTLsv] position archive file ... 
    ar -t [-TLsv] archive [file ...] 
    ar -x [-ouTLsv] archive [file ...] 
make: *** [lib/libxgboost.a] Error 1 

Hat jemand eine dieses Fehler konfrontiert?

Jede Hilfe wird geschätzt. Vielen Dank! Rosh

Antwort

0

Es scheint, dass ich den vollständigen Pfad zu meinem GCC-Compiler in der Konfigurationsdatei hinzufügen muss. Es gab immer noch eine Menge Warnungen, nicht in der Lage zu sein, die offene mp-Version auszuführen, so dass ich nicht sicher bin, ob die Multithreading-Version tatsächlich aktiviert ist. Ich sah hier: Installing OpenMP on Mac OS X 10.11, dass, wenn gcc bereits installiert ist brew erfordern Sie es erneut installieren, um den Vorteil von OpenMP zu erhalten. Werde das versuchen und die Antwort hier aktualisieren. Für meinen jetzigen Testzweck ist dies jedoch ausreichend.